Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS48115 | Not Available | Negative | 7067974 - 7068141 | 5805.03 |
| hypothetical protein | AMED_RS32635 | Not Available | Negative | 7068194 - 7068709 | 18372.1 |
| isoamylase | AMED_RS32640 | Not Available | Positive | 7068915 - 7069196 | 10045.7 |
| lysr substrate-binding domain-containing protein | AMED_RS32645 | Not Available | Negative | 7069219 - 7069944 | 25934.0 |
| duf5997 family protein | AMED_RS32650 | Not Available | Positive | 7069987 - 7070358 | 13523.2 |
| kynureninase | AMED_RS32655 | Not Available | Positive | 7070375 - 7071574 | 42668.0 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS32660 | Not Available | Positive | 7071649 - 7072086 | 15880.1 |
| haloalkane dehalogenase | AMED_RS32665 | Not Available | Positive | 7072097 - 7072927 | 30087.6 |
| tetr/acrr family transcriptional regulator | AMED_RS32670 | Not Available | Negative | 7072947 - 7073573 | 21777.4 |
| fatty acid desaturase | AMED_RS32675 | Not Available | Negative | 7073575 - 7074993 | 52503.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
