Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS49040 | Not Available | Negative | 7057362 - 7057718 | 12846.0 |
| helix-turn-helix domain-containing protein | AMED_RS48490 | Not Available | Positive | 7057699 - 7058115 | 14997.5 |
| is630 family transposase | AMED_RS48495 | Not Available | Positive | 7058004 - 7058786 | 29906.7 |
| nad(p)h-binding protein | AMED_RS32600 | Not Available | Negative | 7058800 - 7059687 | 31784.3 |
| dihydrofolate reductase family protein | AMED_RS32605 | Not Available | Negative | 7059826 - 7060425 | 21539.4 |
| metalloregulator arsr/smtb family transcription factor | AMED_RS32610 | Not Available | Negative | 7060429 - 7061220 | 28388.8 |
| hypothetical protein | AMED_RS32615 | Not Available | Negative | 7061253 - 7062224 | 36176.2 |
| hypothetical protein | AMED_RS32620 | Not Available | Positive | 7062499 - 7063458 | 35100.2 |
| btad domain-containing putative transcriptional regulator | AMED_RS32625 | Not Available | Negative | 7063876 - 7066872 | 106900.0 |
| sdrd b-like domain-containing protein | AMED_RS32630 | Not Available | Positive | 7067082 - 7067882 | 28128.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
