Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | AMED_RS32545 | Not Available | Positive | 7048046 - 7049083 | 37988.1 |
| whib family transcriptional regulator | AMED_RS32550 | Not Available | Negative | 7049221 - 7049484 | 9374.08 |
| rna polymerase sigma factor | AMED_RS32555 | Not Available | Positive | 7050003 - 7050491 | 18151.7 |
| sigma-70 family rna polymerase sigma factor | AMED_RS32560 | Not Available | Positive | 7050638 - 7051234 | 21608.9 |
| lysr family transcriptional regulator | AMED_RS32565 | Not Available | Negative | 7051231 - 7052064 | 30618.2 |
| bile acid:sodium symporter family protein | AMED_RS32570 | Not Available | Positive | 7052161 - 7053129 | 33413.2 |
| hypothetical protein | AMED_RS32575 | Not Available | Negative | 7053238 - 7053507 | 9293.38 |
| Trna-met | Not Available | Not Available | Positive | 7053694 - 7053767 | Not Available |
| multicopper oxidase family protein | AMED_RS32585 | Not Available | Negative | 7054107 - 7056044 | 70440.7 |
| cytochrome p450 | AMED_RS32590 | Not Available | Negative | 7056050 - 7057252 | 43841.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
