Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | AMED_RS32495 | Not Available | Positive | 7036017 - 7038983 | 108276.0 |
| hypothetical protein | AMED_RS32500 | Not Available | Positive | 7039394 - 7039897 | 18633.2 |
| lysr family transcriptional regulator | AMED_RS32505 | Not Available | Positive | 7040035 - 7040940 | 33199.8 |
| caib/baif coa-transferase family protein | AMED_RS32510 | Not Available | Positive | 7041059 - 7042195 | 40431.0 |
| crotonase/enoyl-coa hydratase family protein | AMED_RS32515 | Not Available | Positive | 7042208 - 7042957 | 25908.3 |
| acetoacetate decarboxylase | AMED_RS32520 | Not Available | Positive | 7042954 - 7043700 | 27436.0 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | AMED_RS32525 | Not Available | Positive | 7043697 - 7044623 | 33154.4 |
| acyl-coa dehydrogenase family protein | AMED_RS32530 | Not Available | Positive | 7044625 - 7045821 | 43918.6 |
| lcp family protein | AMED_RS32535 | Not Available | Negative | 7045826 - 7047055 | 41320.9 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS32540 | Not Available | Negative | 7047263 - 7048006 | 25782.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
