Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | AMED_RS32445 | Not Available | Negative | 7026068 - 7026490 | 15606.6 |
| tetr/acrr family transcriptional regulator | AMED_RS32450 | Not Available | Positive | 7026514 - 7027044 | 18920.7 |
| coce/nond family hydrolase c-terminal non-catalytic domain-containing protein | AMED_RS32455 | Not Available | Positive | 7027057 - 7028601 | 55171.4 |
| hypothetical protein | AMED_RS32460 | Not Available | Positive | 7028671 - 7029075 | 14064.8 |
| hypothetical protein | AMED_RS32465 | Not Available | Positive | 7029072 - 7029272 | 6325.31 |
| response regulator transcription factor | AMED_RS32470 | Not Available | Positive | 7029318 - 7030004 | 24142.1 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS32475 | Not Available | Positive | 7030001 - 7031398 | 47739.0 |
| helix-turn-helix domain-containing protein | AMED_RS32480 | Not Available | Positive | 7031600 - 7031953 | 13274.8 |
| tetratricopeptide repeat protein | AMED_RS32485 | Not Available | Positive | 7032105 - 7034147 | 73213.8 |
| hypothetical protein | AMED_RS32490 | Not Available | Negative | 7034522 - 7035742 | 44091.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
