Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS32395 | Not Available | Negative | 7018172 - 7018768 | 20912.8 |
| aminotransferase class v-fold plp-dependent enzyme | AMED_RS32400 | Not Available | Negative | 7018950 - 7019963 | 35226.6 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | AMED_RS32405 | Not Available | Negative | 7020005 - 7020769 | 25743.7 |
| ph domain-containing protein | AMED_RS32410 | Not Available | Negative | 7020779 - 7021747 | 33747.4 |
| metal-dependent hydrolase | AMED_RS49035 | Not Available | Positive | 7021807 - 7021986 | 6460.88 |
| gpp34 family phosphoprotein | AMED_RS32420 | Not Available | Negative | 7022195 - 7022845 | 22950.7 |
| sensor histidine kinase | AMED_RS32425 | Not Available | Positive | 7023016 - 7024251 | 43226.1 |
| response regulator transcription factor | AMED_RS32430 | Not Available | Positive | 7024226 - 7024876 | 22768.6 |
| m50 family metallopeptidase | AMED_RS32435 | Not Available | Negative | 7024873 - 7025580 | 24512.2 |
| helix-turn-helix domain-containing protein | AMED_RS32440 | Not Available | Negative | 7025656 - 7026027 | 13844.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
