Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | AMED_RS32345 | Not Available | Positive | 7008423 - 7009040 | 21878.2 |
| hypothetical protein | AMED_RS32350 | Not Available | Positive | 7009065 - 7010159 | 38976.2 |
| alpha/beta hydrolase family protein | AMED_RS32355 | Not Available | Negative | 7010319 - 7011140 | 28732.4 |
| 30s ribosome-binding factor rbfa | AMED_RS32360 | Not Available | Negative | 7011144 - 7011620 | 17203.0 |
| duf503 domain-containing protein | AMED_RS32365 | Not Available | Negative | 7011640 - 7011933 | 10767.0 |
| translation initiation factor if-2 | AMED_RS32370 | Not Available | Negative | 7012017 - 7015031 | 103030.0 |
| ylxr family protein | AMED_RS32375 | Not Available | Negative | 7015110 - 7015427 | 11543.1 |
| transcription termination factor nusa | AMED_RS32380 | Not Available | Negative | 7015505 - 7016551 | 37596.5 |
| ribosome maturation factor rimp | AMED_RS32385 | Not Available | Negative | 7016548 - 7017090 | 19356.9 |
| ferritin-like domain-containing protein | AMED_RS32390 | Not Available | Positive | 7017200 - 7018135 | 31211.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
