Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(55) synthase trub | AMED_RS32295 | Not Available | Negative | 6999366 - 7000271 | 31677.0 |
| gnat family n-acetyltransferase | AMED_RS32300 | Not Available | Positive | 7000336 - 7000800 | 17017.5 |
| voc family protein | AMED_RS32305 | Not Available | Positive | 7000820 - 7001197 | 13448.8 |
| nitrate/nitrite transporter | AMED_RS32310 | Not Available | Negative | 7001198 - 7002520 | 46086.2 |
| mate family efflux transporter | AMED_RS32315 | Not Available | Negative | 7002818 - 7004137 | 45661.4 |
| bifunctional oligoribonuclease/pap phosphatase nrna | AMED_RS32320 | Not Available | Negative | 7004267 - 7005256 | 34916.4 |
| trm11 family methyltransferase | AMED_RS32325 | Not Available | Positive | 7005282 - 7006313 | 37601.1 |
| flotillin family protein | AMED_RS32330 | Not Available | Negative | 7006326 - 7007477 | 40624.7 |
| hypothetical protein | AMED_RS32335 | Not Available | Negative | 7007498 - 7007725 | 8002.54 |
| tetr/acrr family transcriptional regulator | AMED_RS32340 | Not Available | Positive | 7007884 - 7008426 | 19727.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
