Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | AMED_RS32245 | Not Available | Negative | 6989879 - 6990730 | 30276.5 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | AMED_RS32250 | Not Available | Positive | 6990801 - 6991748 | 35528.2 |
| tetratricopeptide repeat protein | AMED_RS32255 | Not Available | Negative | 6991734 - 6992192 | 17039.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | AMED_RS32260 | Not Available | Negative | 6992189 - 6992929 | 25722.9 |
| pitrilysin family protein | AMED_RS32265 | Not Available | Negative | 6992926 - 6994290 | 49071.5 |
| polyribonucleotide nucleotidyltransferase | AMED_RS32270 | Not Available | Negative | 6994377 - 6996638 | 80189.8 |
| 30s ribosomal protein s15 | AMED_RS32275 | Not Available | Negative | 6996886 - 6997155 | 10292.7 |
| rna 2',3'-cyclic phosphodiesterase | AMED_RS32280 | Not Available | Negative | 6997299 - 6997802 | 18173.6 |
| helix-turn-helix transcriptional regulator | AMED_RS32285 | Not Available | Negative | 6997802 - 6998275 | 17434.1 |
| bifunctional riboflavin kinase/fad synthetase | AMED_RS32290 | Not Available | Negative | 6998355 - 6999338 | 35477.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
