Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system hicb family antitoxin | AMED_RS32195 | Not Available | Positive | 6982682 - 6983203 | 17779.9 |
| duf4097 family beta strand repeat-containing protein | AMED_RS32200 | Not Available | Positive | 6983216 - 6984139 | 31172.4 |
| hypothetical protein | AMED_RS32205 | Not Available | Positive | 6984438 - 6984608 | 5402.45 |
| winged helix-turn-helix domain-containing protein | AMED_RS32210 | Not Available | Negative | 6985152 - 6986366 | 44981.3 |
| gnat family n-acetyltransferase | AMED_RS32215 | Not Available | Positive | 6986426 - 6986983 | 19681.9 |
| metal-dependent hydrolase | AMED_RS49030 | Not Available | Negative | 6987050 - 6987445 | 13976.3 |
| membrane protein | AMED_RS32225 | Not Available | Positive | 6987598 - 6988116 | 19223.0 |
| duf397 domain-containing protein | AMED_RS32230 | Not Available | Negative | 6988081 - 6988260 | 6567.87 |
| scr1 family ta system antitoxin-like transcriptional regulator | AMED_RS32235 | Not Available | Negative | 6988273 - 6989106 | 30597.1 |
| hypothetical protein | AMED_RS32240 | Not Available | Negative | 6989130 - 6989882 | 25432.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
