Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | AMED_RS32145 | Not Available | Positive | 6970809 - 6971756 | 32726.1 |
| amino acid permease | AMED_RS32150 | Not Available | Positive | 6971834 - 6973207 | 49242.0 |
| vwa domain-containing protein | AMED_RS32155 | Not Available | Negative | 6973161 - 6974804 | 57045.3 |
| ribonuclease j | AMED_RS32160 | Not Available | Negative | 6974958 - 6976655 | 60299.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | AMED_RS32165 | Not Available | Negative | 6976652 - 6977665 | 35088.6 |
| serine/threonine-protein kinase | AMED_RS32170 | Not Available | Negative | 6977756 - 6979237 | 52388.7 |
| hypothetical protein | AMED_RS32175 | Not Available | Negative | 6979588 - 6980049 | 17085.1 |
| nramp family divalent metal transporter | AMED_RS32180 | Not Available | Negative | 6980046 - 6981287 | 42414.1 |
| act domain-containing protein | AMED_RS32185 | Not Available | Negative | 6981415 - 6981810 | 13810.6 |
| fad-dependent thymidylate synthase | AMED_RS32190 | Not Available | Negative | 6981810 - 6982562 | 27638.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
