Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | AMED_RS32040 | Not Available | Positive | 6952130 - 6952690 | 20803.8 |
| quinone-dependent dihydroorotate dehydrogenase | AMED_RS32045 | Not Available | Positive | 6952756 - 6953793 | 35937.4 |
| amidase family protein | AMED_RS32050 | Not Available | Negative | 6953765 - 6955174 | 48612.9 |
| phage shock envelope stress response protein pspm | AMED_RS32055 | Not Available | Negative | 6955684 - 6956670 | 35102.5 |
| pspa/im30 family protein | AMED_RS32060 | Not Available | Negative | 6956694 - 6957533 | 30662.2 |
| helix-turn-helix domain-containing protein | AMED_RS32065 | Not Available | Negative | 6957762 - 6958220 | 16383.7 |
| cina family protein | AMED_RS32070 | Not Available | Negative | 6958320 - 6958781 | 15196.2 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | AMED_RS32075 | Not Available | Negative | 6958784 - 6959425 | 22404.7 |
| 30s ribosomal protein s12 methylthiotransferase rimo | AMED_RS32080 | Not Available | Negative | 6959422 - 6960858 | 51738.8 |
| amino-acid n-acetyltransferase | AMED_RS32090 | Not Available | Positive | 6961079 - 6961588 | 18971.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
