Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS31990 | Not Available | Negative | 6939799 - 6940149 | 12235.5 |
| moxr family atpase | AMED_RS31995 | Not Available | Positive | 6940433 - 6941500 | 38401.8 |
| duf58 domain-containing protein | AMED_RS32000 | Not Available | Positive | 6941572 - 6942846 | 45348.8 |
| duf3488 and transglutaminase-like domain-containing protein | AMED_RS32005 | Not Available | Positive | 6943166 - 6945730 | 90522.5 |
| duf3040 domain-containing protein | AMED_RS32010 | Not Available | Negative | 6946004 - 6946405 | 14859.2 |
| dna polymerase iv | AMED_RS32015 | Not Available | Negative | 6946671 - 6947885 | 42869.0 |
| methyltransferase domain-containing protein | AMED_RS32020 | Not Available | Negative | 6948055 - 6948780 | 24845.4 |
| para family protein | AMED_RS32025 | Not Available | Positive | 6948887 - 6949780 | 32113.1 |
| endonuclease viii | AMED_RS32030 | Not Available | Positive | 6949784 - 6950593 | 29854.1 |
| adenosine deaminase | AMED_RS32035 | Not Available | Positive | 6950717 - 6951763 | 37338.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
