Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator argp | AMED_RS31890 | Not Available | Negative | 6917857 - 6918753 | 31464.9 |
| abate domain-containing protein | AMED_RS31895 | Not Available | Negative | 6918799 - 6919335 | 19293.1 |
| mfs transporter | AMED_RS31900 | Not Available | Positive | 6919414 - 6920583 | 40168.9 |
| nad(p)h-binding protein | AMED_RS31905 | Not Available | Negative | 6920580 - 6921410 | 28960.7 |
| cell division protein ftsq/divib | AMED_RS31910 | Not Available | Negative | 6921488 - 6922327 | 30282.5 |
| udp-n-acetylmuramate--l-alanine ligase | AMED_RS31915 | Not Available | Negative | 6922332 - 6923729 | 48291.6 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | AMED_RS31920 | Not Available | Negative | 6923722 - 6924846 | 38294.7 |
| putative lipid ii flippase ftsw | AMED_RS31925 | Not Available | Negative | 6924843 - 6926354 | 53328.3 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | AMED_RS31930 | Not Available | Negative | 6926341 - 6927750 | 48048.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | AMED_RS31935 | Not Available | Negative | 6927752 - 6928834 | 38489.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
