Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS31840 | Not Available | Negative | 6896309 - 6897703 | 50132.5 |
| mbth family nrps accessory protein | AMED_RS31845 | Not Available | Negative | 6897700 - 6897918 | 8055.36 |
| non-ribosomal peptide synthetase | AMED_RS31850 | Not Available | Negative | 6897911 - 6903007 | 178834.0 |
| cytochrome p450 | AMED_RS31855 | Not Available | Negative | 6903004 - 6904260 | 46118.9 |
| hypothetical protein | AMED_RS31860 | Not Available | Negative | 6904395 - 6905138 | 25360.2 |
| glycine amidinotransferase | AMED_RS31865 | Not Available | Positive | 6905245 - 6906375 | 43614.5 |
| amino acid adenylation domain-containing protein | AMED_RS31870 | Not Available | Negative | 6906431 - 6909466 | 106734.0 |
| non-ribosomal peptide synthetase | AMED_RS31875 | Not Available | Negative | 6909463 - 6912813 | 119283.0 |
| non-ribosomal peptide synthetase | AMED_RS31880 | Not Available | Positive | 6913031 - 6915358 | 80405.5 |
| luxr family transcriptional regulator | AMED_RS31885 | Not Available | Positive | 6915504 - 6917852 | 83884.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
