Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | AMED_RS31790 | Not Available | Negative | 6877525 - 6879885 | 81356.5 |
| ornithine cyclodeaminase family protein | AMED_RS31795 | Not Available | Negative | 6879905 - 6880945 | 36428.8 |
| 2,3-diaminopropionate biosynthesis protein sbna | AMED_RS31800 | Not Available | Negative | 6880942 - 6881934 | 35771.8 |
| condensation domain-containing protein | AMED_RS31805 | Not Available | Negative | 6881931 - 6883322 | 50197.1 |
| thioesterase ii family protein | AMED_RS31810 | Not Available | Negative | 6883326 - 6884087 | 27898.4 |
| condensation domain-containing protein | AMED_RS31815 | Not Available | Negative | 6884084 - 6885751 | 60415.0 |
| condensation domain-containing protein | AMED_RS31820 | Not Available | Negative | 6885748 - 6890061 | 152507.0 |
| amino acid adenylation domain-containing protein | AMED_RS31825 | Not Available | Positive | 6890390 - 6891916 | 53456.1 |
| mfs transporter | AMED_RS31830 | Not Available | Positive | 6891916 - 6893136 | 42337.8 |
| non-ribosomal peptide synthetase | AMED_RS31835 | Not Available | Positive | 6893215 - 6896304 | 109671.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
