Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | AMED_RS31740 | Not Available | Negative | 6869174 - 6869869 | 24466.9 |
| glxa family transcriptional regulator | AMED_RS31745 | Not Available | Negative | 6869948 - 6870898 | 34098.5 |
| epoxide hydrolase family protein | AMED_RS31750 | Not Available | Negative | 6870937 - 6872067 | 41723.9 |
| tetr/acrr family transcriptional regulator | AMED_RS31755 | Not Available | Negative | 6872057 - 6872680 | 22715.2 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS31760 | Not Available | Negative | 6872625 - 6873581 | 33606.0 |
| helix-turn-helix transcriptional regulator | AMED_RS31765 | Not Available | Positive | 6873682 - 6874542 | 31574.6 |
| hypothetical protein | AMED_RS31770 | Not Available | Positive | 6874886 - 6875083 | 7137.17 |
| gaf and antar domain-containing protein | AMED_RS31775 | Not Available | Positive | 6875271 - 6876056 | 27857.9 |
| sigb/sigf/sigg family rna polymerase sigma factor | AMED_RS31780 | Not Available | Positive | 6876145 - 6876966 | 30502.3 |
| atp-binding protein | AMED_RS31785 | Not Available | Positive | 6877069 - 6877497 | 15758.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
