Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sige family rna polymerase sigma factor | AMED_RS31690 | Not Available | Negative | 6859787 - 6860281 | 18554.1 |
| iron-containing alcohol dehydrogenase family protein | AMED_RS31695 | Not Available | Negative | 6860363 - 6861493 | 38108.6 |
| nad(p)-dependent oxidoreductase | AMED_RS31700 | Not Available | Negative | 6861505 - 6862422 | 32001.0 |
| aldehyde dehydrogenase family protein | AMED_RS31705 | Not Available | Negative | 6862424 - 6863914 | 53019.8 |
| mandelate racemase/muconate lactonizing enzyme family protein | AMED_RS31710 | Not Available | Negative | 6863902 - 6865011 | 40676.8 |
| formaldehyde-activating enzyme | AMED_RS31715 | Not Available | Negative | 6865008 - 6865568 | 18958.6 |
| iclr family transcriptional regulator | AMED_RS31720 | Not Available | Positive | 6865711 - 6866526 | 29651.3 |
| epoxide hydrolase family protein | AMED_RS31725 | Not Available | Positive | 6866577 - 6867698 | 41419.2 |
| helix-turn-helix domain-containing protein | AMED_RS31730 | Not Available | Negative | 6867723 - 6868517 | 29615.6 |
| carboxymuconolactone decarboxylase family protein | AMED_RS31735 | Not Available | Negative | 6868510 - 6869079 | 20121.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
