Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03619 family f420-dependent llm class oxidoreductase | AMED_RS03080 | Not Available | Negative | 606020 - 606946 | 32723.1 |
| Trna-trp | Not Available | Not Available | Positive | 607153 - 607225 | Not Available |
| preprotein translocase subunit sece | AMED_RS03090 | Not Available | Positive | 607252 - 607692 | 15912.2 |
| transcription termination/antitermination protein nusg | AMED_RS03095 | Not Available | Positive | 607766 - 608632 | 30532.0 |
| 50s ribosomal protein l11 | AMED_RS03100 | Not Available | Positive | 608707 - 609141 | 15368.7 |
| 50s ribosomal protein l1 | AMED_RS03105 | Not Available | Positive | 609334 - 610053 | 25666.2 |
| alpha/beta fold hydrolase | AMED_RS03110 | Not Available | Positive | 610124 - 610897 | 26662.8 |
| hypothetical protein | AMED_RS03115 | Not Available | Negative | 610894 - 611754 | 31185.7 |
| 50s ribosomal protein l10 | AMED_RS03120 | Not Available | Positive | 612067 - 612621 | 19154.7 |
| 50s ribosomal protein l7/l12 | AMED_RS03125 | Not Available | Positive | 612671 - 613054 | 13319.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
