Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esx secretion-associated protein espg | AMED_RS31590 | Not Available | Negative | 6841745 - 6842443 | 25239.2 |
| hypothetical protein | AMED_RS31595 | Not Available | Negative | 6842508 - 6843797 | 44413.7 |
| duf3558 domain-containing protein | AMED_RS31600 | Not Available | Negative | 6843797 - 6844438 | 21491.5 |
| hypothetical protein | AMED_RS31605 | Not Available | Negative | 6844435 - 6844860 | 14796.2 |
| hypothetical protein | AMED_RS31610 | Not Available | Positive | 6845424 - 6845966 | 19394.2 |
| hypothetical protein | AMED_RS31615 | Not Available | Positive | 6846074 - 6846520 | 15620.1 |
| sensor histidine kinase | AMED_RS31620 | Not Available | Positive | 6846546 - 6847739 | 41202.3 |
| response regulator transcription factor | AMED_RS31625 | Not Available | Positive | 6847739 - 6848389 | 23370.4 |
| rdd family protein | AMED_RS31630 | Not Available | Positive | 6848440 - 6848946 | 18098.8 |
| fumarylacetoacetate hydrolase family protein | AMED_RS31635 | Not Available | Negative | 6849010 - 6849885 | 31498.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
