Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | AMED_RS31490 | Not Available | Negative | 6823171 - 6823695 | 18594.7 |
| hypothetical protein | AMED_RS31495 | Not Available | Negative | 6823736 - 6824419 | 24300.5 |
| hypothetical protein | AMED_RS31500 | Not Available | Negative | 6824526 - 6824762 | 8724.46 |
| hypothetical protein | AMED_RS31505 | Not Available | Negative | 6824764 - 6825036 | 9628.33 |
| gntr family transcriptional regulator | AMED_RS31510 | Not Available | Positive | 6825153 - 6825500 | 12451.8 |
| hypothetical protein | AMED_RS31515 | Not Available | Negative | 6825497 - 6825697 | 6884.53 |
| xre family transcriptional regulator | AMED_RS49015 | Not Available | Positive | 6825833 - 6827248 | 50805.7 |
| aminoglycoside phosphotransferase family protein | AMED_RS31525 | Not Available | Negative | 6827208 - 6828098 | 33350.2 |
| gnat family n-acetyltransferase | AMED_RS31530 | Not Available | Negative | 6828190 - 6828852 | 24948.4 |
| hypothetical protein | AMED_RS49020 | Not Available | Positive | 6828927 - 6829229 | 10333.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
