Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3631 domain-containing protein | AMED_RS31395 | Not Available | Negative | 6809122 - 6810471 | 48526.4 |
| dna cytosine methyltransferase | AMED_RS31400 | Not Available | Negative | 6810527 - 6812152 | 58605.9 |
| hypothetical protein | AMED_RS31405 | Not Available | Negative | 6812149 - 6812499 | 12903.1 |
| rrqrl motif-containing zinc-binding protein | AMED_RS31410 | Not Available | Negative | 6812472 - 6812996 | 19320.3 |
| phosphoadenosine phosphosulfate reductase | AMED_RS31415 | Not Available | Negative | 6813027 - 6813917 | 32528.9 |
| hypothetical protein | AMED_RS31420 | Not Available | Negative | 6813917 - 6814288 | 13282.5 |
| hypothetical protein | AMED_RS48110 | Not Available | Negative | 6814382 - 6814555 | 6285.52 |
| bifunctional dna primase/polymerase | AMED_RS31425 | Not Available | Negative | 6814587 - 6815360 | 26838.4 |
| hypothetical protein | AMED_RS31430 | Not Available | Negative | 6815541 - 6815837 | 10747.7 |
| single-stranded dna-binding protein | AMED_RS31435 | Not Available | Negative | 6815853 - 6816317 | 16739.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
