Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | AMED_RS31345 | Not Available | Positive | 6800675 - 6801826 | 39384.4 |
| branched-chain amino acid abc transporter permease | AMED_RS31350 | Not Available | Positive | 6801938 - 6802906 | 34069.0 |
| branched-chain amino acid abc transporter permease | AMED_RS31355 | Not Available | Positive | 6802903 - 6804060 | 41359.3 |
| abc transporter atp-binding protein | AMED_RS31360 | Not Available | Positive | 6804057 - 6804830 | 28437.4 |
| abc transporter atp-binding protein | AMED_RS31365 | Not Available | Positive | 6804820 - 6805533 | 25575.3 |
| duf4352 domain-containing protein | AMED_RS31370 | Not Available | Negative | 6805579 - 6806103 | 18799.7 |
| antar domain-containing response regulator | AMED_RS31375 | Not Available | Negative | 6806138 - 6806752 | 22276.9 |
| Trna-leu | Not Available | Not Available | Positive | 6807006 - 6807079 | Not Available |
| tyrosine-type recombinase/integrase | AMED_RS31385 | Not Available | Negative | 6807237 - 6808637 | 51972.1 |
| alpa family transcriptional regulator | AMED_RS31390 | Not Available | Negative | 6808634 - 6808819 | 7275.74 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
