Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhge/pip family protein | AMED_RS31295 | Not Available | Positive | 6788288 - 6790186 | 65572.1 |
| tetr/acrr family transcriptional regulator | AMED_RS31300 | Not Available | Positive | 6790183 - 6790755 | 20609.0 |
| helix-turn-helix transcriptional regulator | AMED_RS31305 | Not Available | Negative | 6790752 - 6791495 | 26519.6 |
| nadp-dependent oxidoreductase | AMED_RS31310 | Not Available | Positive | 6791584 - 6792510 | 32443.1 |
| serine protease | AMED_RS31315 | Not Available | Negative | 6792772 - 6794373 | 56616.5 |
| ef-hand domain-containing protein | AMED_RS31320 | Not Available | Negative | 6794476 - 6795066 | 20692.1 |
| dna polymerase i | AMED_RS31325 | Not Available | Negative | 6795168 - 6797909 | 100273.0 |
| paai family thioesterase | AMED_RS31330 | Not Available | Positive | 6797972 - 6798412 | 15036.9 |
| lysr family transcriptional regulator | AMED_RS31335 | Not Available | Positive | 6798418 - 6799389 | 35847.2 |
| s9 family peptidase | AMED_RS31340 | Not Available | Negative | 6799355 - 6800125 | 26796.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
