Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | AMED_RS31245 | Not Available | Negative | 6779477 - 6780661 | 42615.4 |
| hypothetical protein | AMED_RS31250 | Not Available | Positive | 6780966 - 6781232 | 9211.47 |
| hypothetical protein | AMED_RS31255 | Not Available | Positive | 6781356 - 6781604 | 8928.95 |
| osmc family protein | AMED_RS31260 | Not Available | Negative | 6781629 - 6782075 | 16180.2 |
| tetr/acrr family transcriptional regulator | AMED_RS31265 | Not Available | Positive | 6782251 - 6782865 | 22490.1 |
| 30s ribosomal protein s1 | AMED_RS31270 | Not Available | Negative | 6782934 - 6784433 | 54998.6 |
| class i sam-dependent methyltransferase | AMED_RS31275 | Not Available | Positive | 6784750 - 6785601 | 30526.5 |
| gnat family n-acetyltransferase | AMED_RS31280 | Not Available | Positive | 6785598 - 6786515 | 31967.3 |
| gnat family n-acetyltransferase | AMED_RS31285 | Not Available | Positive | 6786538 - 6787458 | 32763.5 |
| abc transporter atp-binding protein | AMED_RS31290 | Not Available | Positive | 6787578 - 6788291 | 24585.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
