Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | AMED_RS03030 | Not Available | Negative | 598339 - 599286 | 33694.0 |
| bifunctional diguanylate cyclase/phosphodiesterase | AMED_RS03035 | Not Available | Positive | 599515 - 602160 | 95497.6 |
| Trna-thr | Not Available | Not Available | Positive | 602241 - 602313 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 602442 - 602514 | Not Available |
| 50s ribosomal protein l33 | AMED_RS03050 | Not Available | Positive | 602580 - 602729 | 5985.31 |
| maoc family dehydratase n-terminal domain-containing protein | AMED_RS03055 | Not Available | Positive | 602812 - 603261 | 16298.2 |
| maoc family dehydratase | AMED_RS03060 | Not Available | Positive | 603258 - 603698 | 15548.8 |
| sgnh/gdsl hydrolase family protein | AMED_RS03065 | Not Available | Negative | 603711 - 604616 | 30932.3 |
| hypothetical protein | AMED_RS03070 | Not Available | Negative | 604652 - 605611 | 32673.2 |
| gntr family transcriptional regulator | AMED_RS03075 | Not Available | Negative | 605608 - 605958 | 12493.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
