Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvra | AMED_RS31045 | Not Available | Negative | 6735951 - 6738815 | 105264.0 |
| acyltransferase | AMED_RS31050 | Not Available | Negative | 6738937 - 6740142 | 43923.0 |
| mbl fold metallo-hydrolase | AMED_RS31055 | Not Available | Positive | 6740253 - 6740930 | 24250.3 |
| uvrd-helicase domain-containing protein | AMED_RS31060 | Not Available | Positive | 6740956 - 6742929 | 72697.9 |
| hypothetical protein | AMED_RS31065 | Not Available | Positive | 6743040 - 6743531 | 17121.5 |
| duf1684 domain-containing protein | AMED_RS31070 | Not Available | Negative | 6743557 - 6744339 | 28010.6 |
| hypothetical protein | AMED_RS31075 | Not Available | Negative | 6744423 - 6745412 | 36717.9 |
| hypothetical protein | AMED_RS31080 | Not Available | Negative | 6745580 - 6745747 | 5550.75 |
| crp/fnr family transcriptional regulator | AMED_RS31085 | Not Available | Negative | 6745858 - 6746562 | 25361.4 |
| ribonuclease hi | AMED_RS31090 | Not Available | Positive | 6746637 - 6747098 | 17076.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
