Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | AMED_RS30995 | Not Available | Negative | 6726956 - 6727624 | 23927.8 |
| sensor histidine kinase | AMED_RS31000 | Not Available | Negative | 6727621 - 6729195 | 55122.0 |
| c4-dicarboxylate transporter dcta | AMED_RS31005 | Not Available | Positive | 6729351 - 6730697 | 47466.1 |
| helix-turn-helix domain-containing protein | AMED_RS31010 | Not Available | Negative | 6730796 - 6731197 | 14704.9 |
| dha2 family efflux mfs transporter permease subunit | AMED_RS31015 | Not Available | Positive | 6731303 - 6732715 | 47382.3 |
| srpbcc family protein | AMED_RS31020 | Not Available | Negative | 6732758 - 6733201 | 16790.4 |
| anti-sigma factor | AMED_RS31025 | Not Available | Negative | 6733207 - 6733920 | 24831.4 |
| sigma-70 family rna polymerase sigma factor | AMED_RS31030 | Not Available | Negative | 6733917 - 6734468 | 19874.7 |
| lipoprotein | AMED_RS31035 | Not Available | Negative | 6734611 - 6735114 | 16813.9 |
| fibronectin type iii domain-containing protein | AMED_RS31040 | Not Available | Positive | 6735341 - 6735886 | 19588.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
