Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | AMED_RS30945 | Not Available | Negative | 6714123 - 6715097 | 33975.9 |
| amino acid deaminase | AMED_RS30950 | Not Available | Positive | 6715210 - 6716508 | 46425.2 |
| amidohydrolase family protein | AMED_RS30955 | Not Available | Positive | 6716508 - 6718103 | 56783.0 |
| gntp family permease | AMED_RS30960 | Not Available | Positive | 6718100 - 6719488 | 47248.4 |
| lactonase family protein | AMED_RS30965 | Not Available | Positive | 6719531 - 6720658 | 38460.5 |
| extracellular solute-binding protein | AMED_RS30970 | Not Available | Positive | 6720684 - 6721958 | 44087.4 |
| carbohydrate abc transporter permease | AMED_RS30975 | Not Available | Positive | 6721961 - 6722905 | 33730.3 |
| carbohydrate abc transporter permease | AMED_RS30980 | Not Available | Positive | 6722896 - 6723744 | 30650.5 |
| beta-n-acetylhexosaminidase | AMED_RS30985 | Not Available | Positive | 6723746 - 6725113 | 49662.8 |
| m64 family metallopeptidase | AMED_RS30990 | Not Available | Negative | 6725114 - 6726862 | 61823.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
