Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6159 family protein | AMED_RS30895 | Not Available | Negative | 6707488 - 6708321 | 29031.9 |
| rna methyltransferase | AMED_RS30900 | Not Available | Negative | 6708374 - 6709189 | 27814.1 |
| 50s ribosomal protein l20 | AMED_RS30905 | Not Available | Negative | 6709186 - 6709563 | 13964.8 |
| 50s ribosomal protein l35 | AMED_RS30910 | Not Available | Negative | 6709631 - 6709825 | 7393.27 |
| translation initiation factor if-3 | AMED_RS30915 | Not Available | Negative | 6709894 - 6710511 | 23061.7 |
| duf1844 domain-containing protein | AMED_RS30920 | Not Available | Positive | 6710719 - 6711078 | 12557.8 |
| gntr family transcriptional regulator | AMED_RS30925 | Not Available | Positive | 6711312 - 6711956 | 23737.1 |
| 1-aminocyclopropane-1-carboxylate deaminase | AMED_RS30930 | Not Available | Positive | 6711953 - 6712948 | 35061.7 |
| rida family protein | AMED_RS30935 | Not Available | Negative | 6712985 - 6713368 | 13433.0 |
| iclr family transcriptional regulator | AMED_RS30940 | Not Available | Negative | 6713368 - 6714126 | 27613.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
