Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | AMED_RS30850 | Not Available | Negative | 6695815 - 6696732 | 32338.3 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | AMED_RS30855 | Not Available | Negative | 6696729 - 6697889 | 39344.6 |
| n-acetyl-gamma-glutamyl-phosphate reductase | AMED_RS30860 | Not Available | Negative | 6697886 - 6698914 | 34532.3 |
| yafy family protein | AMED_RS30865 | Not Available | Positive | 6698989 - 6699945 | 34553.4 |
| hypothetical protein | AMED_RS49575 | Not Available | Negative | 6700137 - 6700262 | 4234.06 |
| hypothetical protein | AMED_RS30870 | Not Available | Negative | 6700342 - 6700839 | 17752.7 |
| alpha/beta hydrolase | AMED_RS30875 | Not Available | Negative | 6701043 - 6702626 | 56999.1 |
| dna alkylation repair protein | AMED_RS30880 | Not Available | Positive | 6702820 - 6703509 | 26028.4 |
| phenylalanine--trna ligase subunit beta | AMED_RS30885 | Not Available | Negative | 6703726 - 6706293 | 91634.9 |
| phenylalanine--trna ligase subunit alpha | AMED_RS30890 | Not Available | Negative | 6706293 - 6707354 | 38937.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
