Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine--trna ligase | AMED_RS30800 | Not Available | Negative | 6687506 - 6688786 | 46987.6 |
| dna-3-methyladenine glycosylase | AMED_RS30805 | Not Available | Negative | 6688819 - 6689457 | 22845.3 |
| hypothetical protein | AMED_RS30810 | Not Available | Positive | 6689569 - 6690123 | 20715.6 |
| duf4166 domain-containing protein | AMED_RS30815 | Not Available | Positive | 6690120 - 6690779 | 24630.5 |
| tetr/acrr family transcriptional regulator | AMED_RS30820 | Not Available | Positive | 6690779 - 6691441 | 23019.4 |
| argininosuccinate lyase | AMED_RS30825 | Not Available | Negative | 6691434 - 6692849 | 50756.1 |
| argininosuccinate synthase | AMED_RS30830 | Not Available | Negative | 6692846 - 6693172 | 11748.0 |
| arginine repressor | AMED_RS30835 | Not Available | Negative | 6693169 - 6693681 | 17685.1 |
| ornithine carbamoyltransferase | AMED_RS30840 | Not Available | Negative | 6693678 - 6694604 | 33692.1 |
| acetylornithine transaminase | AMED_RS30845 | Not Available | Negative | 6694604 - 6695818 | 40876.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
