Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | AMED_RS30705 | Not Available | Negative | 6665151 - 6665804 | 24358.2 |
| ncs1 family nucleobase:cation symporter-1 | AMED_RS30710 | Not Available | Positive | 6666014 - 6667435 | 51482.3 |
| aspartate/glutamate racemase family protein | AMED_RS30715 | Not Available | Positive | 6667432 - 6668139 | 24610.7 |
| alginate lyase family protein | AMED_RS30720 | Not Available | Positive | 6668231 - 6669496 | 45857.3 |
| peptidase inhibitor family i36 protein | AMED_RS30725 | Not Available | Positive | 6669595 - 6670026 | 14774.1 |
| copper transporter | AMED_RS30730 | Not Available | Negative | 6670044 - 6670994 | 31063.7 |
| putative cytokinetic ring protein stea | AMED_RS30735 | Not Available | Negative | 6670991 - 6672175 | 41692.6 |
| duf1266 domain-containing protein | AMED_RS30740 | Not Available | Negative | 6672264 - 6673439 | 43146.7 |
| zinc-binding alcohol dehydrogenase family protein | AMED_RS30745 | Not Available | Negative | 6673436 - 6674428 | 34991.8 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS30750 | Not Available | Positive | 6674495 - 6674938 | 16155.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
