Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | AMED_RS30655 | Not Available | Negative | 6655720 - 6656472 | 27688.5 |
| smc-scp complex subunit scpb | AMED_RS30660 | Not Available | Negative | 6656459 - 6657301 | 29636.7 |
| scpa family protein | AMED_RS30665 | Not Available | Negative | 6657298 - 6658200 | 33455.7 |
| hypothetical protein | AMED_RS30670 | Not Available | Negative | 6658200 - 6658619 | 14869.5 |
| para family protein | AMED_RS30675 | Not Available | Negative | 6658616 - 6659587 | 34670.8 |
| site-specific tyrosine recombinase xerd | AMED_RS30680 | Not Available | Negative | 6659735 - 6660637 | 32078.4 |
| duf1707 domain-containing protein | AMED_RS30685 | Not Available | Positive | 6660745 - 6661272 | 18752.7 |
| nudix domain-containing protein | AMED_RS30690 | Not Available | Negative | 6661369 - 6661998 | 22364.7 |
| ctp synthase | AMED_RS30695 | Not Available | Negative | 6661995 - 6663695 | 61425.2 |
| acyltransferase | AMED_RS30700 | Not Available | Negative | 6663785 - 6664945 | 43081.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
