Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pls/posa family non-ribosomal peptide synthetase | AMED_RS30605 | Not Available | Negative | 6643012 - 6646908 | 136023.0 |
| ribosome biogenesis gtpase der | AMED_RS30610 | Not Available | Negative | 6647241 - 6648701 | 52189.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AMED_RS30615 | Not Available | Negative | 6648719 - 6649279 | 19673.1 |
| (d)cmp kinase | AMED_RS30620 | Not Available | Negative | 6649444 - 6650148 | 24405.0 |
| tetr/acrr family transcriptional regulator | AMED_RS30625 | Not Available | Negative | 6650239 - 6650784 | 19453.2 |
| duf4267 domain-containing protein | AMED_RS30630 | Not Available | Positive | 6650897 - 6651265 | 12820.3 |
| cation:proton antiporter regulatory subunit | AMED_RS30635 | Not Available | Positive | 6651302 - 6651784 | 16560.8 |
| cation:proton antiporter | AMED_RS30640 | Not Available | Positive | 6651793 - 6652986 | 40342.6 |
| xaa-pro dipeptidyl-peptidase | AMED_RS30645 | Not Available | Negative | 6652983 - 6654824 | 63880.3 |
| class i sam-dependent methyltransferase | AMED_RS30650 | Not Available | Positive | 6654892 - 6655710 | 28911.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
