Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| msmeg_1061 family fmn-dependent ppox-type flavoprotein | AMED_RS30555 | Not Available | Positive | 6628841 - 6629461 | 22621.1 |
| pdr/vanb family oxidoreductase | AMED_RS30560 | Not Available | Positive | 6629463 - 6630344 | 31468.4 |
| duf4184 family protein | AMED_RS30565 | Not Available | Negative | 6630318 - 6631055 | 25946.0 |
| helix-turn-helix domain-containing protein | AMED_RS30570 | Not Available | Positive | 6631138 - 6632013 | 31862.2 |
| maleylacetate reductase and hydroxyquinol 1,2-dioxygenase domain-containing protein | AMED_RS30575 | Not Available | Positive | 6632089 - 6633834 | 61863.6 |
| fad-dependent monooxygenase | AMED_RS30580 | Not Available | Positive | 6633831 - 6635573 | 62339.8 |
| peptidylprolyl isomerase | AMED_RS30585 | Not Available | Negative | 6635715 - 6636638 | 31651.8 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | AMED_RS30590 | Not Available | Negative | 6636717 - 6638993 | 83499.1 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | AMED_RS30595 | Not Available | Negative | 6639020 - 6641314 | 84097.7 |
| m1 family metallopeptidase | AMED_RS30600 | Not Available | Negative | 6641502 - 6642923 | 52159.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
