Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | AMED_RS30505 | Not Available | Positive | 6621406 - 6622215 | 29025.5 |
| nad(p)-dependent oxidoreductase | AMED_RS30510 | Not Available | Positive | 6622239 - 6623045 | 28394.7 |
| clp protease n-terminal domain-containing protein | AMED_RS30515 | Not Available | Negative | 6623081 - 6623743 | 23587.8 |
| helix-turn-helix domain-containing protein | AMED_RS30520 | Not Available | Negative | 6623743 - 6623952 | 7861.26 |
| polysaccharide deacetylase family protein | AMED_RS30525 | Not Available | Positive | 6624063 - 6624794 | 26449.8 |
| histidine kinase | AMED_RS30530 | Not Available | Negative | 6624736 - 6625725 | 34765.0 |
| response regulator transcription factor | AMED_RS30535 | Not Available | Positive | 6625748 - 6626326 | 19976.3 |
| hypothetical protein | AMED_RS30540 | Not Available | Positive | 6626381 - 6626809 | 15457.5 |
| right-handed parallel beta-helix repeat-containing protein | AMED_RS30545 | Not Available | Positive | 6626906 - 6628177 | 43824.6 |
| tetr/acrr family transcriptional regulator | AMED_RS30550 | Not Available | Negative | 6628167 - 6628784 | 22985.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
