Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein bl36 | AMED_RS30455 | Not Available | Positive | 6609248 - 6609370 | 4473.57 |
| voc family protein | AMED_RS30460 | Not Available | Negative | 6609608 - 6609976 | 12705.8 |
| winged helix-turn-helix transcriptional regulator | AMED_RS30465 | Not Available | Positive | 6610065 - 6610694 | 22850.4 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS30470 | Not Available | Negative | 6610701 - 6612149 | 52916.5 |
| polysaccharide lyase 8 family protein | AMED_RS30475 | Not Available | Negative | 6612221 - 6614593 | 83129.0 |
| aldehyde dehydrogenase (nadp(+)) | AMED_RS30480 | Not Available | Negative | 6614901 - 6616355 | 50583.9 |
| hypothetical protein | AMED_RS30485 | Not Available | Negative | 6616371 - 6617498 | 39337.6 |
| glucarate dehydratase family protein | AMED_RS30490 | Not Available | Negative | 6617503 - 6618759 | 45267.1 |
| 5-dehydro-4-deoxyglucarate dehydratase | AMED_RS30495 | Not Available | Negative | 6618759 - 6619694 | 32432.9 |
| sodium:solute symporter family protein | AMED_RS30500 | Not Available | Negative | 6619744 - 6621252 | 54477.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
