Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | AMED_RS30405 | Not Available | Negative | 6596777 - 6597169 | 14661.4 |
| yafy family protein | AMED_RS30410 | Not Available | Positive | 6597267 - 6598205 | 33651.5 |
| amp-binding protein | AMED_RS30415 | Not Available | Positive | 6598504 - 6600570 | 74521.3 |
| gyri-like domain-containing protein | AMED_RS30420 | Not Available | Negative | 6600699 - 6601298 | 22728.1 |
| padr family transcriptional regulator | AMED_RS30425 | Not Available | Negative | 6601298 - 6601807 | 18335.1 |
| swim zinc finger family protein | AMED_RS30430 | Not Available | Positive | 6601974 - 6603281 | 46316.1 |
| duf5691 domain-containing protein | AMED_RS30435 | Not Available | Positive | 6603322 - 6604707 | 49987.1 |
| aaa family atpase | AMED_RS30440 | Not Available | Positive | 6604704 - 6605792 | 38687.1 |
| duf5682 family protein | AMED_RS30445 | Not Available | Positive | 6605789 - 6607972 | 77577.6 |
| vwa domain-containing protein | AMED_RS30450 | Not Available | Positive | 6608008 - 6609171 | 41798.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
