Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phb depolymerase family esterase | AMED_RS30355 | Not Available | Positive | 6586967 - 6588169 | 41251.8 |
| tomm precursor leader peptide-binding protein | AMED_RS30360 | Not Available | Negative | 6588287 - 6590470 | 78811.9 |
| hypothetical protein | AMED_RS30365 | Not Available | Negative | 6590467 - 6590706 | 8417.23 |
| hypothetical protein | AMED_RS30370 | Not Available | Negative | 6590822 - 6590995 | 5845.95 |
| gaf domain-containing protein | AMED_RS30375 | Not Available | Negative | 6591149 - 6593002 | 64855.3 |
| mfs transporter | AMED_RS30380 | Not Available | Negative | 6593063 - 6594430 | 48247.4 |
| 3-hydroxybutyrate dehydrogenase | AMED_RS30385 | Not Available | Negative | 6594467 - 6595216 | 25987.1 |
| duf397 domain-containing protein | AMED_RS30390 | Not Available | Negative | 6595266 - 6595454 | 6784.13 |
| helix-turn-helix transcriptional regulator | AMED_RS30395 | Not Available | Negative | 6595451 - 6596296 | 31159.6 |
| hypothetical protein | AMED_RS30400 | Not Available | Positive | 6596383 - 6596823 | 15981.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
