Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | AMED_RS30305 | Not Available | Negative | 6578259 - 6578453 | 6789.37 |
| nadh-ubiquinone oxidoreductase-f iron-sulfur binding region domain-containing protein | AMED_RS30310 | Not Available | Negative | 6578450 - 6579580 | 38671.6 |
| ferric reductase-like transmembrane domain-containing protein | AMED_RS30315 | Not Available | Negative | 6579577 - 6580128 | 19604.2 |
| fad:protein fmn transferase | AMED_RS30320 | Not Available | Negative | 6580125 - 6581117 | 34501.9 |
| hypothetical protein | AMED_RS30325 | Not Available | Negative | 6581114 - 6581368 | 8028.04 |
| alkaline phosphatase family protein | AMED_RS30330 | Not Available | Positive | 6581591 - 6582466 | 30985.1 |
| mfs transporter | AMED_RS30335 | Not Available | Positive | 6582513 - 6583724 | 40988.1 |
| pd40 domain-containing protein | AMED_RS30340 | Not Available | Positive | 6583721 - 6584701 | 33970.1 |
| hypothetical protein | AMED_RS30345 | Not Available | Positive | 6585037 - 6585438 | 14061.2 |
| tannase/feruloyl esterase family alpha/beta hydrolase | AMED_RS30350 | Not Available | Negative | 6585447 - 6586751 | 45979.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
