Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc family protein | AMED_RS30255 | Not Available | Positive | 6570115 - 6570624 | 17733.2 |
| daunorubicin resistance protein drra family abc transporter atp-binding protein | AMED_RS30260 | Not Available | Positive | 6570704 - 6571681 | 34611.2 |
| abc transporter permease | AMED_RS30265 | Not Available | Positive | 6571678 - 6572481 | 28954.9 |
| nitroreductase/quinone reductase family protein | AMED_RS30270 | Not Available | Negative | 6572503 - 6572928 | 16174.2 |
| duf6069 family protein | AMED_RS30275 | Not Available | Negative | 6572925 - 6573497 | 20109.6 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS30280 | Not Available | Positive | 6573602 - 6574567 | 34326.5 |
| serine/threonine-protein kinase | AMED_RS30285 | Not Available | Positive | 6574605 - 6576260 | 56704.6 |
| hypothetical protein | AMED_RS30290 | Not Available | Positive | 6576495 - 6576779 | 10172.7 |
| ycii family protein | AMED_RS30295 | Not Available | Positive | 6576835 - 6577386 | 19782.2 |
| sir2 family nad-dependent protein deacetylase | AMED_RS30300 | Not Available | Negative | 6577460 - 6578203 | 26104.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
