Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS30205 | Not Available | Positive | 6561744 - 6562151 | 13593.6 |
| l,d-transpeptidase | AMED_RS30210 | Not Available | Negative | 6562106 - 6562543 | 15312.3 |
| hypothetical protein | AMED_RS30215 | Not Available | Negative | 6562622 - 6563527 | 31726.7 |
| hypothetical protein | AMED_RS30220 | Not Available | Positive | 6563650 - 6563955 | 10834.4 |
| hypothetical protein | AMED_RS30225 | Not Available | Negative | 6563966 - 6564400 | 14482.4 |
| helix-turn-helix transcriptional regulator | AMED_RS30230 | Not Available | Positive | 6564748 - 6565614 | 33175.2 |
| 2og-fe dioxygenase family protein | AMED_RS30235 | Not Available | Positive | 6565643 - 6566353 | 26207.9 |
| stas domain-containing protein | AMED_RS30240 | Not Available | Negative | 6566369 - 6566749 | 13842.1 |
| peptide-methionine (s)-s-oxide reductase msra | AMED_RS30245 | Not Available | Positive | 6566889 - 6567404 | 19389.5 |
| m4 family metallopeptidase | AMED_RS30250 | Not Available | Positive | 6567762 - 6570038 | 77478.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
