Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4910 domain-containing protein | AMED_RS02930 | Not Available | Negative | 576511 - 577791 | 47191.9 |
| nad(p)-dependent oxidoreductase | AMED_RS02935 | Not Available | Negative | 577791 - 578810 | 36412.9 |
| pig-l deacetylase family protein | AMED_RS02940 | Not Available | Negative | 578816 - 579463 | 23680.2 |
| glucose-1-phosphate cytidylyltransferase | AMED_RS02945 | Not Available | Negative | 579460 - 580251 | 29489.2 |
| class i sam-dependent methyltransferase | AMED_RS02950 | Not Available | Negative | 580253 - 581545 | 47322.3 |
| yrdb family protein | AMED_RS02955 | Not Available | Positive | 581744 - 582112 | 12426.8 |
| llm class f420-dependent oxidoreductase | AMED_RS02960 | Not Available | Negative | 582158 - 583033 | 31425.8 |
| ynce family protein | AMED_RS02965 | Not Available | Negative | 583074 - 584042 | 32439.5 |
| zinc metalloprotease htpx | AMED_RS02970 | Not Available | Positive | 584177 - 585028 | 30285.3 |
| llm class flavin-dependent oxidoreductase | AMED_RS02975 | Not Available | Positive | 585081 - 586166 | 38061.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
