Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS48105 | Not Available | Negative | 6543134 - 6543277 | 5528.75 |
| btad domain-containing putative transcriptional regulator | AMED_RS30105 | Not Available | Positive | 6543395 - 6546184 | 99705.9 |
| hypothetical protein | AMED_RS30110 | Not Available | Positive | 6546218 - 6546916 | 25393.1 |
| lpo_1073/vpar_1526 family protein | AMED_RS30120 | Not Available | Positive | 6547613 - 6548605 | 36446.8 |
| hypothetical protein | AMED_RS30125 | Not Available | Positive | 6549052 - 6549717 | 24936.8 |
| duf5677 domain-containing protein | AMED_RS30130 | Not Available | Positive | 6549753 - 6550604 | 32267.3 |
| helix-turn-helix domain-containing protein | AMED_RS30135 | Not Available | Positive | 6550876 - 6552111 | 44585.3 |
| flavoprotein | AMED_RS30140 | Not Available | Positive | 6552116 - 6552673 | 19906.9 |
| hypothetical protein | AMED_RS30145 | Not Available | Positive | 6552777 - 6553049 | 9661.46 |
| hypothetical protein | AMED_RS30150 | Not Available | Positive | 6553086 - 6553538 | 16555.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
