Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stas domain-containing protein | AMED_RS30055 | Not Available | Positive | 6533429 - 6533731 | 10196.2 |
| gaf and antar domain-containing protein | AMED_RS30060 | Not Available | Positive | 6534003 - 6534734 | 25984.8 |
| atp-binding protein | AMED_RS30065 | Not Available | Negative | 6534738 - 6535148 | 15099.0 |
| glucodextranase domon-like domain-containing protein | AMED_RS30070 | Not Available | Positive | 6535272 - 6538541 | 113054.0 |
| dinb family protein | AMED_RS30075 | Not Available | Positive | 6538555 - 6539133 | 21676.6 |
| aldo/keto reductase | AMED_RS30080 | Not Available | Negative | 6539137 - 6540153 | 35818.6 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS30085 | Not Available | Negative | 6540206 - 6541066 | 30399.5 |
| tetr/acrr family transcriptional regulator | AMED_RS30090 | Not Available | Positive | 6541096 - 6541719 | 22665.1 |
| alpha/beta fold hydrolase | AMED_RS30095 | Not Available | Positive | 6541784 - 6542614 | 29880.6 |
| duf742 domain-containing protein | AMED_RS30100 | Not Available | Negative | 6542601 - 6542972 | 13474.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
