Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | AMED_RS29960 | Not Available | Positive | 6513511 - 6514566 | 36037.4 |
| hypothetical protein | AMED_RS29965 | Not Available | Positive | 6514628 - 6515050 | 15549.0 |
| duf3072 domain-containing protein | AMED_RS29970 | Not Available | Positive | 6515117 - 6515317 | 7206.14 |
| hypothetical protein | AMED_RS29975 | Not Available | Positive | 6515650 - 6515928 | 9648.0 |
| hypothetical protein | AMED_RS48100 | Not Available | Positive | 6515961 - 6516137 | 6451.35 |
| transcription termination factor rho | AMED_RS29980 | Not Available | Negative | 6516142 - 6517203 | 38049.9 |
| atp-binding protein | AMED_RS29985 | Not Available | Positive | 6517450 - 6517965 | 18173.2 |
| hypothetical protein | AMED_RS29990 | Not Available | Negative | 6518132 - 6518344 | 8089.45 |
| phb depolymerase family esterase | AMED_RS49560 | Not Available | Negative | 6518408 - 6520642 | 78890.7 |
| helix-turn-helix transcriptional regulator | AMED_RS30000 | Not Available | Positive | 6520858 - 6521679 | 30066.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
