Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secdf p1 head subdomain-containing protein | AMED_RS29910 | Not Available | Negative | 6505504 - 6506079 | 19797.5 |
| cpbp family intramembrane glutamic endopeptidase | AMED_RS29915 | Not Available | Negative | 6506086 - 6506700 | 20941.6 |
| nad(p)h-binding protein | AMED_RS29920 | Not Available | Negative | 6506697 - 6507593 | 32004.7 |
| dmt family transporter | AMED_RS29925 | Not Available | Negative | 6507604 - 6508518 | 30687.2 |
| lysr family transcriptional regulator | AMED_RS29930 | Not Available | Positive | 6508592 - 6509527 | 33184.2 |
| lysr substrate-binding domain-containing protein | AMED_RS29935 | Not Available | Negative | 6509907 - 6510179 | 9561.49 |
| hypothetical protein | AMED_RS49000 | Not Available | Positive | 6510178 - 6510399 | 7815.3 |
| threonine/serine dehydratase | AMED_RS29945 | Not Available | Positive | 6510466 - 6511419 | 32144.3 |
| llm class flavin-dependent oxidoreductase | AMED_RS29950 | Not Available | Negative | 6511361 - 6512176 | 29192.7 |
| peptidoglycan-binding protein | AMED_RS29955 | Not Available | Negative | 6512260 - 6513090 | 28669.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
