Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | AMED_RS29860 | Not Available | Negative | 6494381 - 6494776 | 14227.3 |
| cyclase family protein | AMED_RS29865 | Not Available | Positive | 6494887 - 6495660 | 27417.4 |
| thiamine pyrophosphate-binding protein | AMED_RS29870 | Not Available | Positive | 6495657 - 6497276 | 55946.7 |
| hnh endonuclease signature motif containing protein | AMED_RS29875 | Not Available | Negative | 6497471 - 6498700 | 44094.9 |
| lrp/asnc family transcriptional regulator | AMED_RS29880 | Not Available | Negative | 6498988 - 6499428 | 16468.9 |
| indolepyruvate ferredoxin oxidoreductase family protein | AMED_RS29885 | Not Available | Positive | 6499595 - 6502960 | 119793.0 |
| response regulator | AMED_RS29890 | Not Available | Negative | 6502941 - 6503567 | 21783.3 |
| hypothetical protein | AMED_RS29895 | Not Available | Negative | 6503633 - 6504139 | 18420.1 |
| fmn-dependent nadh-azoreductase | AMED_RS29900 | Not Available | Negative | 6504305 - 6504946 | 22616.8 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS29905 | Not Available | Positive | 6505029 - 6505499 | 17312.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
