Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS29810 | Not Available | Positive | 6483264 - 6483458 | 7235.41 |
| sam-dependent methyltransferase | AMED_RS29815 | Not Available | Positive | 6483543 - 6484397 | 31214.3 |
| cu044_2847 family protein | AMED_RS29820 | Not Available | Negative | 6484402 - 6484752 | 12308.5 |
| abc transporter substrate-binding protein | AMED_RS29825 | Not Available | Negative | 6484777 - 6486063 | 46213.7 |
| membrane protein | AMED_RS29830 | Not Available | Negative | 6486063 - 6487178 | 38296.9 |
| vwa domain-containing protein | AMED_RS29835 | Not Available | Negative | 6487175 - 6488605 | 51209.6 |
| serine/threonine-protein kinase | AMED_RS29840 | Not Available | Negative | 6488610 - 6490823 | 79601.5 |
| trypsin-like peptidase domain-containing protein | AMED_RS29845 | Not Available | Negative | 6490820 - 6492364 | 55074.6 |
| abc transporter permease | AMED_RS29850 | Not Available | Negative | 6492518 - 6493489 | 34575.6 |
| abc transporter atp-binding protein | AMED_RS29855 | Not Available | Negative | 6493486 - 6494370 | 31665.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
